BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B07SP1|AL429169
(339 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig327 655 0.0
>3x_Contig327
Length = 1076
Score = 655 bits (329), Expect = 0.0
Identities = 337/339 (99%), Gaps = 1/339 (0%)
Strand = Plus / Plus
Query: 1 atcatttggtata-tttttactctaccattataaaaatgatgtcttaatttagtaaaaca 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atcatttggtataatttttactctaccattataaaaatgatgtcttaatttagtaaaaca 640
Query: 60 aggtaaagctatagtagttatttcaactccataataaattttaccttttaatctttcccc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aggtaaagctatagtagttatttcaactccataataaattttaccttttaatctttcccc 700
Query: 120 gcggactcctcccctgggattaccaggggaggagccgcggggtgttttaattaattttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gcggactcctcccctgggattaccaggggaggagccgcggggtgttttaattaattttgg 760
Query: 180 aggacttacacaataatgatttaatttattatatacatataawacatattctacttgttt 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 761 aggacttacacaataatgatttaatttattatatacatataaaacatattctacttgttt 820
Query: 240 taaagtttgtttaaattttaatctactattaattaatgtattttttgaactatattcaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 taaagtttgtttaaattttaatctactattaattaatgtattttttgaactatattcaat 880
Query: 300 tcaaccatctgttaataaaattccattaattatatatat 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tcaaccatctgttaataaaattccattaattatatatat 919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3763
Number of Sequences: 1807
Number of extensions: 3763
Number of successful extensions: 109
Number of sequences better than 1.0e-20: 1
length of query: 339
length of database: 10,358,551
effective HSP length: 16
effective length of query: 323
effective length of database: 10,329,639
effective search space: 3336473397
effective search space used: 3336473397
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)